From 9161c489f9eb648a33a6a37762d3062136e66118 Mon Sep 17 00:00:00 2001 From: gwen Date: Tue, 19 Sep 2023 15:49:43 +0200 Subject: [PATCH] Squashed 'actes-princiers/data/01_raw/' changes from a07c038..9f9dd4d 9f9dd4d correction brb_lo_ii_1365_08_08a.xml git-subtree-dir: actes-princiers/data/01_raw git-subtree-split: 9f9dd4d3d67a6a85e244b16071e693fb5b3cdebf --- .gitignore | 7 +- .../01_raw/.gitlab-ci.yml => .gitlab-ci.yml | 0 README.md | 100 +-- actes-princiers/.gitignore | 157 ----- actes-princiers/conf/README.md | 23 - actes-princiers/conf/base/catalog.yml | 142 ---- actes-princiers/conf/base/logging.yml | 41 -- actes-princiers/conf/base/parameters.yml | 3 - actes-princiers/conf/local/.gitkeep | 0 actes-princiers/data/01_raw/.gitignore | 6 - actes-princiers/data/01_raw/README.md | 92 --- actes-princiers/data/02_intermediate/.gitkeep | 0 actes-princiers/data/03_primary/.gitkeep | 0 actes-princiers/data/04_feature/.gitkeep | 0 actes-princiers/data/08_reporting/.gitkeep | 0 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+.ipynb_checkpoints/ +*/.ipynb_checkpoints/ +.venv/ diff --git a/actes-princiers/data/01_raw/.gitlab-ci.yml b/.gitlab-ci.yml similarity index 100% rename from actes-princiers/data/01_raw/.gitlab-ci.yml rename to .gitlab-ci.yml diff --git a/README.md b/README.md index d54fd6e..ed01dc1 100644 --- a/README.md +++ b/README.md @@ -1,66 +1,92 @@ -# Actes princiers -- data transformations +# data -## Project Name -human readable name : `Actes Princiers` -The project name 'Actes Princiers' has been applied to: +## Getting started -- The project title in `datascience/actes-princiers/README.md` -- The folder created for your project in `datascience/actes-princiers` -- The project's python package in `datascience/actes-princiers/src/actes_princiers` +To make it easy for you to get started with GitLab, here's a list of recommended next steps. -A best-practice setup includes initialising git and creating a virtual environment before running 'pip install -r src/requirements.txt' +Already a pro? Just edit this README.md and make it your own. Want to make it easy? [Use the template at the bottom](#editing-this-readme)! -## Getting started +## Add your files + +- [ ] [Create](https://docs.gitlab.com/ee/user/project/repository/web_editor.html#create-a-file) or [upload](https://docs.gitlab.com/ee/user/project/repository/web_editor.html#upload-a-file) files +- [ ] [Add files using the command line](https://docs.gitlab.com/ee/gitlab-basics/add-file.html#add-a-file-using-the-command-line) or push an existing Git repository with the following command: + +``` +cd existing_repo +git remote add origin https://gitlab.huma-num.fr/medieval-acts/princely-acts/data.git +git branch -M main +git push -uf origin main +``` + +## Integrate with your tools + +- [ ] [Set up project integrations](https://gitlab.huma-num.fr/medieval-acts/princely-acts/data/-/settings/integrations) -- Install a virtual environment : `python -m venv .venv` -- Enable the virtual environment : `source .venv/bin/activate` -- install kedro `pip install kedro` -- Install the packages and libraries `pip install -r src/requirements.txt` +## Collaborate with your team -**go to `actes-princiers`'s folder** +- [ ] [Invite team members and collaborators](https://docs.gitlab.com/ee/user/project/members/) +- [ ] [Create a new merge request](https://docs.gitlab.com/ee/user/project/merge_requests/creating_merge_requests.html) +- [ ] [Automatically close issues from merge requests](https://docs.gitlab.com/ee/user/project/issues/managing_issues.html#closing-issues-automatically) +- [ ] [Enable merge request approvals](https://docs.gitlab.com/ee/user/project/merge_requests/approvals/) +- [ ] [Set auto-merge](https://docs.gitlab.com/ee/user/project/merge_requests/merge_when_pipeline_succeeds.html) -Then open a terminal in the `actes-princiers`'s folder -and launch jupyter : `kedro jupyter notebook` -or start the ipython prompt : `kedro ipython` +## Test and Deploy -## Launching the pipelines +Use the built-in continuous integration in GitLab. -**go to `actes-princiers`'s folder** +- [ ] [Get started with GitLab CI/CD](https://docs.gitlab.com/ee/ci/quick_start/index.html) +- [ ] [Analyze your code for known vulnerabilities with Static Application Security Testing(SAST)](https://docs.gitlab.com/ee/user/application_security/sast/) +- [ ] [Deploy to Kubernetes, Amazon EC2, or Amazon ECS using Auto Deploy](https://docs.gitlab.com/ee/topics/autodevops/requirements.html) +- [ ] [Use pull-based deployments for improved Kubernetes management](https://docs.gitlab.com/ee/user/clusters/agent/) +- [ ] [Set up protected environments](https://docs.gitlab.com/ee/ci/environments/protected_environments.html) -Open a terminal in the `actes-princiers`'s folder and launch kedro +*** -`kedro run` +# Editing this README -or launch a specific node in the pipeline with: +When you're ready to make this README your own, just edit this file and use the handy template below (or feel free to structure it however you want - this is just a starting point!). Thank you to [makeareadme.com](https://www.makeareadme.com/) for this template. -`kedro run --nodes=` +## Suggestions for a good README +Every project is different, so consider which of these sections apply to yours. The sections used in the template are suggestions for most open source projects. Also keep in mind that while a README can be too long and detailed, too long is better than too short. If you think your README is too long, consider utilizing another form of documentation rather than cutting out information. -or a search by tags with: +## Name +Choose a self-explaining name for your project. -`kedro run --tags=` +## Description +Let people know what your project can do specifically. Provide context and add a link to any reference visitors might be unfamiliar with. A list of Features or a Background subsection can also be added here. If there are alternatives to your project, this is a good place to list differentiating factors. -The current tags are: +## Badges +On some READMEs, you may see small images that convey metadata, such as whether or not all the tests are passing for the project. You can use Shields to add some to your README. Many services also have instructions for adding a badge. -- `kedro run --tags="etl_transform"`: launches the XML to JSON transformations -- `kedro run --tags="populate_database"`: populates the mongodb distant database - on the target server +## Visuals +Depending on what you are making, it can be a good idea to include screenshots or even a video (you'll frequently see GIFs rather than actual videos). Tools like ttygif can help, but check out Asciinema for a more sophisticated method. -## Visualizing the pipelines +## Installation +Within a particular ecosystem, there may be a common way of installing things, such as using Yarn, NuGet, or Homebrew. However, consider the possibility that whoever is reading your README is a novice and would like more guidance. Listing specific steps helps remove ambiguity and gets people to using your project as quickly as possible. If it only runs in a specific context like a particular programming language version or operating system or has dependencies that have to be installed manually, also add a Requirements subsection. -**you shall install kedro-viz before** +## Usage +Use examples liberally, and show the expected output if you can. It's helpful to have inline the smallest example of usage that you can demonstrate, while providing links to more sophisticated examples if they are too long to reasonably include in the README. -install kedro viz with +## Support +Tell people where they can go to for help. It can be any combination of an issue tracker, a chat room, an email address, etc. -`pip install kedro-viz` +## Roadmap +If you have ideas for releases in the future, it is a good idea to list them in the README. -Then launch the command +## Contributing +State if you are open to contributions and what your requirements are for accepting them. -`kedro viz` +For people who want to make changes to your project, it's helpful to have some documentation on how to get started. Perhaps there is a script that they should run or some environment variables that they need to set. Make these steps explicit. These instructions could also be useful to your future self. -## tips +You can also document commands to lint the code or run tests. These steps help to ensure high code quality and reduce the likelihood that the changes inadvertently break something. Having instructions for running tests is especially helpful if it requires external setup, such as starting a Selenium server for testing in a browser. -You need to reload Kedro variables by calling `%reload_kedro` in your notebook and re-run the code snippet +## Authors and acknowledgment +Show your appreciation to those who have contributed to the project. +## License +For open source projects, say how it is licensed. +## Project status +If you have run out of energy or time for your project, put a note at the top of the README saying that development has slowed down or stopped completely. Someone may choose to fork your project or volunteer to step in as a maintainer or owner, allowing your project to keep going. You can also make an explicit request for maintainers. diff --git a/actes-princiers/.gitignore b/actes-princiers/.gitignore deleted file mode 100644 index 329c811..0000000 --- a/actes-princiers/.gitignore +++ /dev/null @@ -1,157 +0,0 @@ -########################## -# KEDRO PROJECT - -# ignore all local configuration -conf/local/** -!conf/local/.gitkeep -.telemetry - -# ignore potentially sensitive credentials files -conf/**/*credentials* - -# ignore everything in the following folders -# data/** -logs/** - -# except their sub-folders -#!data/**/ -!logs/**/ - -# also keep all .gitkeep files -!.gitkeep - - - -########################## -# Common files - -# IntelliJ -.idea/ -*.iml -out/ -.idea_modules/ - -### macOS -*.DS_Store -.AppleDouble -.LSOverride -.Trashes - -# Vim -*~ -.*.swo -.*.swp - -# emacs -*~ -\#*\# -/.emacs.desktop -/.emacs.desktop.lock -*.elc - -# JIRA plugin -atlassian-ide-plugin.xml - -# C extensions -*.so - -### Python template -# Byte-compiled / optimized / DLL files -__pycache__/ -*.py[cod] -*$py.class - -# Distribution / packaging -.Python -build/ -develop-eggs/ -dist/ -downloads/ -eggs/ -.eggs/ -lib/ -lib64/ -parts/ -sdist/ -var/ -wheels/ -*.egg-info/ -.installed.cfg -*.egg -MANIFEST - -# PyInstaller -# Usually these files are written by a python script from a template -# before PyInstaller builds the exe, so as to inject date/other infos into it. -*.manifest -*.spec - -# Installer logs -pip-log.txt -pip-delete-this-directory.txt - -# Unit test / coverage reports -htmlcov/ -.tox/ -.coverage -.coverage.* -.cache -nosetests.xml -coverage.xml -*.cover -.hypothesis/ - -# Translations -*.mo -*.pot - -# Django stuff: -*.log -.static_storage/ -.media/ -local_settings.py - -# Flask stuff: -instance/ -.webassets-cache - -# Scrapy stuff: -.scrapy - -# Sphinx documentation -docs/_build/ - -# PyBuilder -target/ - -# Jupyter Notebook -.ipynb_checkpoints - -# IPython -.ipython/profile_default/history.sqlite -.ipython/profile_default/startup/README - -# pyenv -.python-version - -# celery beat schedule file -celerybeat-schedule - -# SageMath parsed files -*.sage.py - -# Environments -.env -.envrc -.venv -env/ -venv/ -ENV/ -env.bak/ -venv.bak/ - -# mkdocs documentation -/site - -# mypy -.mypy_cache/ diff --git a/actes-princiers/conf/README.md b/actes-princiers/conf/README.md deleted file mode 100644 index 5f4f2a9..0000000 --- a/actes-princiers/conf/README.md +++ /dev/null @@ -1,23 +0,0 @@ -# What is this for? - -This folder should be used to store configuration files used by Kedro or by separate tools. - -This file can be used to provide users with instructions for how to reproduce local configuration with their own credentials. You can edit the file however you like, but you may wish to retain the information below and add your own section in the [Instructions](#Instructions) section. - -## Local configuration - -The `local` folder should be used for configuration that is either user-specific (e.g. IDE configuration) or protected (e.g. security keys). - -> *Note:* Please do not check in any local configuration to version control. - -## Base configuration - -The `base` folder is for shared configuration, such as non-sensitive and project-related configuration that may be shared across team members. - -WARNING: Please do not put access credentials in the base configuration folder. - -## Instructions - -## Need help? - -[Find out more about configuration from the Kedro documentation](https://docs.kedro.org/en/stable/configuration/index.html). diff --git a/actes-princiers/conf/base/catalog.yml b/actes-princiers/conf/base/catalog.yml deleted file mode 100644 index 62276b4..0000000 --- a/actes-princiers/conf/base/catalog.yml +++ /dev/null @@ -1,142 +0,0 @@ -# houses and princes -# input (read only) datasets -houses: - type: yaml.YAMLDataSet - filepath: data/01_raw/yaml/houses.yaml - -houses_trigram: - type: json.JSONDataSet - filepath: data/01_raw/json/house_trigram.json - -prince_bigram: - type: json.JSONDataSet - filepath: data/01_raw/json/prince_bigram.json -# ________________________________________________________________________ -# BOURBON -# input (read only) dataset -bourbon: - type: actesdataset.XMLDataSetCollection - housename: bourbon - folderpath: data/01_raw/xml/Bourbon - xsltstylesheet: templates/xsl/actes_princiers.xsl - -# input (read only) dataset -bourbon_json: - type: actesdataset.BsXMLDataSetCollection - housename: bourbon - folderpath: data/01_raw/xml/Bourbon - -# _________________________________________________________________________ - -# output (write) **pseudo xml** dataset -bourbon_xmlcontent: - type: actesdataset.XMLDataSetCollection - housename: bourbon - folderpath: data/02_intermediate/Bourbon/pseudoxml - xsltstylesheet: templates/xsl/actes_princiers.xsl - -# input (read) **pseudo xml** dataset -# as it is **not** regular xml, an xml loader cannot be used -bourbon_pseudoxmlcontent: - type: actesdataset.TextDataSetCollection - housename: bourbon - folderpath: data/02_intermediate/Bourbon/pseudoxml - -# input (read) and output (write) dataset -bourbon_jsonoutput: - type: actesdataset.JSONDataSetCollection - housename: bourbon - folderpath: data/02_intermediate/Bourbon/json - -# output (write) and input (read) dataset -bourbon_fulljsonoutput: - type: actesdataset.JSONDataSetCollection - housename: bourbon - folderpath: data/02_intermediate/Bourbon/fulljson - -# ________________________________________________________________________ -# BERRY -# input (read only) dataset -berry: - type: actesdataset.XMLDataSetCollection - housename: berry - folderpath: data/01_raw/xml/Berry - xsltstylesheet: templates/xsl/actes_princiers.xsl - -# input (read only) dataset -berry_json: - type: actesdataset.BsXMLDataSetCollection - housename: berry - folderpath: data/01_raw/xml/Berry - -# _________________________________________________________________________ - -# output (write) **pseudo xml** dataset -berry_xmlcontent: - type: actesdataset.XMLDataSetCollection - housename: berry - folderpath: data/02_intermediate/Berry/pseudoxml - xsltstylesheet: templates/xsl/actes_princiers.xsl - -# input (read) **pseudo xml** dataset -# as it is **not** regular xml, an xml loader cannot be used -berry_pseudoxmlcontent: - type: actesdataset.TextDataSetCollection - housename: berry - folderpath: data/02_intermediate/Berry/pseudoxml - -# input (read) and output (write) dataset -berry_jsonoutput: - type: actesdataset.JSONDataSetCollection - housename: berry - folderpath: data/02_intermediate/Berry/json - -# output (write) and input (read) dataset -berry_fulljsonoutput: - type: actesdataset.JSONDataSetCollection - housename: berry - folderpath: data/02_intermediate/Berry/fulljson - -# ________________________________________________________________________ -# ANJOU -# input (read only) dataset -anjou: - type: actesdataset.XMLDataSetCollection - housename: anjou - folderpath: data/01_raw/xml/Anjou - xsltstylesheet: templates/xsl/actes_princiers.xsl - -# input (read only) dataset -anjou_json: - type: actesdataset.BsXMLDataSetCollection - housename: anjou - folderpath: data/01_raw/xml/Anjou - -# _________________________________________________________________________ - -# output (write) **pseudo xml** dataset -anjou_xmlcontent: - type: actesdataset.XMLDataSetCollection - housename: anjou - folderpath: data/02_intermediate/Anjou/pseudoxml - xsltstylesheet: templates/xsl/actes_princiers.xsl - -# input (read) **pseudo xml** dataset -# as it is **not** regular xml, an xml loader cannot be used -anjou_pseudoxmlcontent: - type: actesdataset.TextDataSetCollection - housename: anjou - folderpath: data/02_intermediate/Anjou/pseudoxml - -# input (read) and output (write) dataset -anjou_jsonoutput: - type: actesdataset.JSONDataSetCollection - housename: anjou - folderpath: data/02_intermediate/Anjou/json - -# output (write) and input (read) dataset -anjou_fulljsonoutput: - type: actesdataset.JSONDataSetCollection - housename: anjou - folderpath: data/02_intermediate/Anjou/fulljson - diff --git a/actes-princiers/conf/base/logging.yml b/actes-princiers/conf/base/logging.yml deleted file mode 100644 index 67b741b..0000000 --- a/actes-princiers/conf/base/logging.yml +++ /dev/null @@ -1,41 +0,0 @@ -version: 1 - -disable_existing_loggers: False - -formatters: - simple: - format: "%(asctime)s - %(name)s - %(levelname)s - %(message)s" - -handlers: - console: - class: logging.StreamHandler - level: INFO - formatter: simple - stream: ext://sys.stdout - - info_file_handler: - class: logging.handlers.RotatingFileHandler - level: INFO - formatter: simple - filename: logs/info.log - maxBytes: 10485760 # 10MB - backupCount: 20 - encoding: utf8 - delay: True - - rich: - class: kedro.logging.RichHandler - rich_tracebacks: True - # Advance options for customisation. - # See https://docs.kedro.org/en/stable/logging/logging.html#project-side-logging-configuration - # tracebacks_show_locals: False - -loggers: - kedro: - level: INFO - - actes_princiers: - level: INFO - -root: - handlers: [rich, info_file_handler] diff --git a/actes-princiers/conf/base/parameters.yml b/actes-princiers/conf/base/parameters.yml deleted file mode 100644 index 131ab24..0000000 --- a/actes-princiers/conf/base/parameters.yml +++ /dev/null @@ -1,3 +0,0 @@ -version: 1.0 -db_name: actesdb -db_collection_name: actes diff --git a/actes-princiers/conf/local/.gitkeep b/actes-princiers/conf/local/.gitkeep deleted file mode 100644 index e69de29..0000000 diff --git a/actes-princiers/data/01_raw/.gitignore b/actes-princiers/data/01_raw/.gitignore deleted file mode 100644 index b059c44..0000000 --- a/actes-princiers/data/01_raw/.gitignore +++ /dev/null @@ -1,6 +0,0 @@ -/tex-pdf -/xsl -compilation_latex.ipynb -.ipynb_checkpoints/ -*/.ipynb_checkpoints/ -.venv/ diff --git a/actes-princiers/data/01_raw/README.md b/actes-princiers/data/01_raw/README.md deleted file mode 100644 index ed01dc1..0000000 --- a/actes-princiers/data/01_raw/README.md +++ /dev/null @@ -1,92 +0,0 @@ -# data - - - -## Getting started - -To make it easy for you to get started with GitLab, here's a list of recommended next steps. - -Already a pro? Just edit this README.md and make it your own. Want to make it easy? [Use the template at the bottom](#editing-this-readme)! - -## Add your files - -- [ ] [Create](https://docs.gitlab.com/ee/user/project/repository/web_editor.html#create-a-file) or [upload](https://docs.gitlab.com/ee/user/project/repository/web_editor.html#upload-a-file) files -- [ ] [Add files using the command line](https://docs.gitlab.com/ee/gitlab-basics/add-file.html#add-a-file-using-the-command-line) or push an existing Git repository with the following command: - -``` -cd existing_repo -git remote add origin https://gitlab.huma-num.fr/medieval-acts/princely-acts/data.git -git branch -M main -git push -uf origin main -``` - -## Integrate with your tools - -- [ ] [Set up project integrations](https://gitlab.huma-num.fr/medieval-acts/princely-acts/data/-/settings/integrations) - -## Collaborate with your team - -- [ ] [Invite team members and collaborators](https://docs.gitlab.com/ee/user/project/members/) -- [ ] [Create a new merge request](https://docs.gitlab.com/ee/user/project/merge_requests/creating_merge_requests.html) -- [ ] [Automatically close issues from merge requests](https://docs.gitlab.com/ee/user/project/issues/managing_issues.html#closing-issues-automatically) -- [ ] [Enable merge request approvals](https://docs.gitlab.com/ee/user/project/merge_requests/approvals/) -- [ ] [Set auto-merge](https://docs.gitlab.com/ee/user/project/merge_requests/merge_when_pipeline_succeeds.html) - -## Test and Deploy - -Use the built-in continuous integration in GitLab. - -- [ ] [Get started with GitLab CI/CD](https://docs.gitlab.com/ee/ci/quick_start/index.html) -- [ ] [Analyze your code for known vulnerabilities with Static Application Security Testing(SAST)](https://docs.gitlab.com/ee/user/application_security/sast/) -- [ ] [Deploy to Kubernetes, Amazon EC2, or Amazon ECS using Auto Deploy](https://docs.gitlab.com/ee/topics/autodevops/requirements.html) -- [ ] [Use pull-based deployments for improved Kubernetes management](https://docs.gitlab.com/ee/user/clusters/agent/) -- [ ] [Set up protected environments](https://docs.gitlab.com/ee/ci/environments/protected_environments.html) - -*** - -# Editing this README - -When you're ready to make this README your own, just edit this file and use the handy template below (or feel free to structure it however you want - this is just a starting point!). Thank you to [makeareadme.com](https://www.makeareadme.com/) for this template. - -## Suggestions for a good README -Every project is different, so consider which of these sections apply to yours. The sections used in the template are suggestions for most open source projects. Also keep in mind that while a README can be too long and detailed, too long is better than too short. If you think your README is too long, consider utilizing another form of documentation rather than cutting out information. - -## Name -Choose a self-explaining name for your project. - -## Description -Let people know what your project can do specifically. Provide context and add a link to any reference visitors might be unfamiliar with. A list of Features or a Background subsection can also be added here. If there are alternatives to your project, this is a good place to list differentiating factors. - -## Badges -On some READMEs, you may see small images that convey metadata, such as whether or not all the tests are passing for the project. You can use Shields to add some to your README. Many services also have instructions for adding a badge. - -## Visuals -Depending on what you are making, it can be a good idea to include screenshots or even a video (you'll frequently see GIFs rather than actual videos). Tools like ttygif can help, but check out Asciinema for a more sophisticated method. - -## Installation -Within a particular ecosystem, there may be a common way of installing things, such as using Yarn, NuGet, or Homebrew. However, consider the possibility that whoever is reading your README is a novice and would like more guidance. Listing specific steps helps remove ambiguity and gets people to using your project as quickly as possible. If it only runs in a specific context like a particular programming language version or operating system or has dependencies that have to be installed manually, also add a Requirements subsection. - -## Usage -Use examples liberally, and show the expected output if you can. It's helpful to have inline the smallest example of usage that you can demonstrate, while providing links to more sophisticated examples if they are too long to reasonably include in the README. - -## Support -Tell people where they can go to for help. It can be any combination of an issue tracker, a chat room, an email address, etc. - -## Roadmap -If you have ideas for releases in the future, it is a good idea to list them in the README. - -## Contributing -State if you are open to contributions and what your requirements are for accepting them. - -For people who want to make changes to your project, it's helpful to have some documentation on how to get started. Perhaps there is a script that they should run or some environment variables that they need to set. Make these steps explicit. These instructions could also be useful to your future self. - -You can also document commands to lint the code or run tests. These steps help to ensure high code quality and reduce the likelihood that the changes inadvertently break something. Having instructions for running tests is especially helpful if it requires external setup, such as starting a Selenium server for testing in a browser. - -## Authors and acknowledgment -Show your appreciation to those who have contributed to the project. - -## License -For open source projects, say how it is licensed. - -## Project status -If you have run out of energy or time for your project, put a note at the top of the README saying that development has slowed down or stopped completely. Someone may choose to fork your project or volunteer to step in as a maintainer or owner, allowing your project to keep going. You can also make an explicit request for maintainers. diff --git a/actes-princiers/data/02_intermediate/.gitkeep b/actes-princiers/data/02_intermediate/.gitkeep deleted file mode 100644 index e69de29..0000000 diff --git a/actes-princiers/data/03_primary/.gitkeep b/actes-princiers/data/03_primary/.gitkeep deleted file mode 100644 index e69de29..0000000 diff --git a/actes-princiers/data/04_feature/.gitkeep b/actes-princiers/data/04_feature/.gitkeep deleted file mode 100644 index e69de29..0000000 diff --git a/actes-princiers/data/08_reporting/.gitkeep b/actes-princiers/data/08_reporting/.gitkeep deleted file mode 100644 index e69de29..0000000 diff --git a/actes-princiers/logs/.gitkeep b/actes-princiers/logs/.gitkeep deleted file mode 100644 index e69de29..0000000 diff --git a/actes-princiers/notebooks/.gitkeep b/actes-princiers/notebooks/.gitkeep deleted file mode 100644 index e69de29..0000000 diff --git a/actes-princiers/notebooks/LoadDataCatalog.ipynb b/actes-princiers/notebooks/LoadDataCatalog.ipynb deleted file mode 100644 index 608ed58..0000000 --- a/actes-princiers/notebooks/LoadDataCatalog.ipynb +++ /dev/null @@ -1,620 +0,0 @@ -{ - "cells": [ - { - "cell_type": "markdown", - "id": "aeacd24e", - "metadata": {}, - "source": [ - "# Catalogs\n", - "\n", - "## Chargement des actors" - ] - }, - { - "cell_type": "code", - "execution_count": 2, - "id": "ae9bc24c", - "metadata": {}, - "outputs": [ - { - "data": { - "text/html": [ - "
╭─────────────────────────────── Traceback (most recent call last) ────────────────────────────────╮\n",
-       "│ in <module>:1                                                                                    │\n",
-       "│                                                                                                  │\n",
-       "│ ❱ 1 catalog                                                                                      │\n",
-       "│   2 dir(catalog)                                                                                 │\n",
-       "│   3                                                                                              │\n",
-       "╰──────────────────────────────────────────────────────────────────────────────────────────────────╯\n",
-       "NameError: name 'catalog' is not defined\n",
-       "
\n" - ], - "text/plain": [ - "\u001b[31m╭─\u001b[0m\u001b[31m──────────────────────────────\u001b[0m\u001b[31m \u001b[0m\u001b[1;31mTraceback \u001b[0m\u001b[1;2;31m(most recent call last)\u001b[0m\u001b[31m \u001b[0m\u001b[31m───────────────────────────────\u001b[0m\u001b[31m─╮\u001b[0m\n", - "\u001b[31m│\u001b[0m in \u001b[92m\u001b[0m:\u001b[94m1\u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[31m❱ \u001b[0m1 catalog \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2m2 \u001b[0m\u001b[96mdir\u001b[0m(catalog) \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2m3 \u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m╰──────────────────────────────────────────────────────────────────────────────────────────────────╯\u001b[0m\n", - "\u001b[1;91mNameError: \u001b[0mname \u001b[32m'catalog'\u001b[0m is not defined\n" - ] - }, - "metadata": {}, - "output_type": "display_data" - } - ], - "source": [ - "catalog\n", - "dir(catalog)" - ] - }, - { - "cell_type": "code", - "execution_count": 1, - "id": "40417f25", - "metadata": {}, - "outputs": [ - { - "data": { - "text/html": [ - "
[06/30/23 17:50:49] INFO     Loading data from 'xmlreflector' (XMLHousesReflector)...           data_catalog.py:345\n",
-       "
\n" - ], - "text/plain": [ - "\u001b[2;36m[06/30/23 17:50:49]\u001b[0m\u001b[2;36m \u001b[0m\u001b[34mINFO \u001b[0m Loading data from \u001b[32m'xmlreflector'\u001b[0m \u001b[1m(\u001b[0mXMLHousesReflector\u001b[1m)\u001b[0m\u001b[33m...\u001b[0m \u001b]8;id=287074;file:///home/gwen/.local/lib/python3.10/site-packages/kedro/io/data_catalog.py\u001b\\\u001b[2mdata_catalog.py\u001b[0m\u001b]8;;\u001b\\\u001b[2m:\u001b[0m\u001b]8;id=134334;file:///home/gwen/.local/lib/python3.10/site-packages/kedro/io/data_catalog.py#345\u001b\\\u001b[2m345\u001b[0m\u001b]8;;\u001b\\\n" - ] - }, - "metadata": {}, - "output_type": "display_data" - }, - { - "data": { - "text/html": [ - "
╭─────────────────────────────── Traceback (most recent call last) ────────────────────────────────╮\n",
-       "│ /home/gwen/.local/lib/python3.10/site-packages/kedro/io/core.py:187 in load                      │\n",
-       "│                                                                                                  │\n",
-       "│   184 │   │   self._logger.debug(\"Loading %s\", str(self))                                        │\n",
-       "│   185 │   │                                                                                      │\n",
-       "│   186 │   │   try:                                                                               │\n",
-       "│ ❱ 187 │   │   │   return self._load()                                                            │\n",
-       "│   188 │   │   except DataSetError:                                                               │\n",
-       "│   189 │   │   │   raise                                                                          │\n",
-       "│   190 │   │   except Exception as exc:                                                           │\n",
-       "│                                                                                                  │\n",
-       "│ /media/gwen/maxtor/gwen/entrepot/cnrs/nicolas/depot/datascience/actes-princiers/src/actesdataset │\n",
-       "│ .py:62 in _load                                                                                  │\n",
-       "│                                                                                                  │\n",
-       "│    59 │   │   self.filepath = filepath                                                           │\n",
-       "│    60 │                                                                                          │\n",
-       "│    61 │   def _load(self):                                                                       │\n",
-       "│ ❱  62 │   │   raise \"C'est chargé!\"                                                              │\n",
-       "│    63 │                                                                                          │\n",
-       "│    64 │   def _save(self):                                                                       │\n",
-       "│    65 │   │   raise NotImplementedError(\"Attention : dataset en lecture seule !\")                │\n",
-       "╰──────────────────────────────────────────────────────────────────────────────────────────────────╯\n",
-       "TypeError: exceptions must derive from BaseException\n",
-       "\n",
-       "The above exception was the direct cause of the following exception:\n",
-       "\n",
-       "╭─────────────────────────────── Traceback (most recent call last) ────────────────────────────────╮\n",
-       "│ /tmp/ipykernel_28884/4226322454.py:1 in <module>                                                 │\n",
-       "│                                                                                                  │\n",
-       "│ [Errno 2] No such file or directory: '/tmp/ipykernel_28884/4226322454.py'                        │\n",
-       "│                                                                                                  │\n",
-       "│ /home/gwen/.local/lib/python3.10/site-packages/kedro/io/data_catalog.py:349 in load              │\n",
-       "│                                                                                                  │\n",
-       "│   346 │   │   │   \"Loading data from '%s' (%s)...\", name, type(dataset).__name__                 │\n",
-       "│   347 │   │   )                                                                                  │\n",
-       "│   348 │   │                                                                                      │\n",
-       "│ ❱ 349 │   │   result = dataset.load()                                                            │\n",
-       "│   350 │   │                                                                                      │\n",
-       "│   351 │   │   return result                                                                      │\n",
-       "│   352                                                                                            │\n",
-       "│                                                                                                  │\n",
-       "│ /home/gwen/.local/lib/python3.10/site-packages/kedro/io/core.py:196 in load                      │\n",
-       "│                                                                                                  │\n",
-       "│   193 │   │   │   message = (                                                                    │\n",
-       "│   194 │   │   │   │   f\"Failed while loading data from data set {str(self)}.\\n{str(exc)}\"        │\n",
-       "│   195 │   │   │   )                                                                              │\n",
-       "│ ❱ 196 │   │   │   raise DataSetError(message) from exc                                           │\n",
-       "│   197 │                                                                                          │\n",
-       "│   198 │   def save(self, data: _DI) -> None:                                                     │\n",
-       "│   199 │   │   \"\"\"Saves data by delegation to the provided save method.                           │\n",
-       "╰──────────────────────────────────────────────────────────────────────────────────────────────────╯\n",
-       "DataSetError: Failed while loading data from data set XMLHousesReflector(name=my own dataset).\n",
-       "exceptions must derive from BaseException\n",
-       "
\n" - ], - "text/plain": [ - "\u001b[31m╭─\u001b[0m\u001b[31m────────────────────────────── \u001b[0m\u001b[1;31mTraceback \u001b[0m\u001b[1;2;31m(most recent call last)\u001b[0m\u001b[31m ───────────────────────────────\u001b[0m\u001b[31m─╮\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2;33m/home/gwen/.local/lib/python3.10/site-packages/kedro/io/\u001b[0m\u001b[1;33mcore.py\u001b[0m:\u001b[94m187\u001b[0m in \u001b[92mload\u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2m184 \u001b[0m\u001b[2m│ │ \u001b[0m\u001b[96mself\u001b[0m._logger.debug(\u001b[33m\"\u001b[0m\u001b[33mLoading \u001b[0m\u001b[33m%s\u001b[0m\u001b[33m\"\u001b[0m, \u001b[96mstr\u001b[0m(\u001b[96mself\u001b[0m)) \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2m185 \u001b[0m\u001b[2m│ │ \u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2m186 \u001b[0m\u001b[2m│ │ \u001b[0m\u001b[94mtry\u001b[0m: \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[31m❱ \u001b[0m187 \u001b[2m│ │ │ \u001b[0m\u001b[94mreturn\u001b[0m \u001b[96mself\u001b[0m._load() \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2m188 \u001b[0m\u001b[2m│ │ \u001b[0m\u001b[94mexcept\u001b[0m DataSetError: \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2m189 \u001b[0m\u001b[2m│ │ │ \u001b[0m\u001b[94mraise\u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2m190 \u001b[0m\u001b[2m│ │ \u001b[0m\u001b[94mexcept\u001b[0m \u001b[96mException\u001b[0m \u001b[94mas\u001b[0m exc: \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2;33m/media/gwen/maxtor/gwen/entrepot/cnrs/nicolas/depot/datascience/actes-princiers/src/\u001b[0m\u001b[1;33mactesdataset\u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[1;33m.py\u001b[0m:\u001b[94m62\u001b[0m in \u001b[92m_load\u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2m 59 \u001b[0m\u001b[2m│ │ \u001b[0m\u001b[96mself\u001b[0m.filepath = filepath \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2m 60 \u001b[0m\u001b[2m│ \u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2m 61 \u001b[0m\u001b[2m│ \u001b[0m\u001b[94mdef\u001b[0m \u001b[92m_load\u001b[0m(\u001b[96mself\u001b[0m): \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[31m❱ \u001b[0m 62 \u001b[2m│ │ \u001b[0m\u001b[94mraise\u001b[0m \u001b[33m\"\u001b[0m\u001b[33mC\u001b[0m\u001b[33m'\u001b[0m\u001b[33mest chargé!\u001b[0m\u001b[33m\"\u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2m 63 \u001b[0m\u001b[2m│ \u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2m 64 \u001b[0m\u001b[2m│ \u001b[0m\u001b[94mdef\u001b[0m \u001b[92m_save\u001b[0m(\u001b[96mself\u001b[0m): \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2m 65 \u001b[0m\u001b[2m│ │ \u001b[0m\u001b[94mraise\u001b[0m \u001b[96mNotImplementedError\u001b[0m(\u001b[33m\"\u001b[0m\u001b[33mAttention : dataset en lecture seule !\u001b[0m\u001b[33m\"\u001b[0m) \u001b[31m│\u001b[0m\n", - "\u001b[31m╰──────────────────────────────────────────────────────────────────────────────────────────────────╯\u001b[0m\n", - "\u001b[1;91mTypeError: \u001b[0mexceptions must derive from BaseException\n", - "\n", - "\u001b[3mThe above exception was the direct cause of the following exception:\u001b[0m\n", - "\n", - "\u001b[31m╭─\u001b[0m\u001b[31m────────────────────────────── \u001b[0m\u001b[1;31mTraceback \u001b[0m\u001b[1;2;31m(most recent call last)\u001b[0m\u001b[31m ───────────────────────────────\u001b[0m\u001b[31m─╮\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2;33m/tmp/ipykernel_28884/\u001b[0m\u001b[1;33m4226322454.py\u001b[0m:\u001b[94m1\u001b[0m in \u001b[92m\u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[3;31m[Errno 2] No such file or directory: '/tmp/ipykernel_28884/4226322454.py'\u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2;33m/home/gwen/.local/lib/python3.10/site-packages/kedro/io/\u001b[0m\u001b[1;33mdata_catalog.py\u001b[0m:\u001b[94m349\u001b[0m in \u001b[92mload\u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2m346 \u001b[0m\u001b[2m│ │ │ \u001b[0m\u001b[33m\"\u001b[0m\u001b[33mLoading data from \u001b[0m\u001b[33m'\u001b[0m\u001b[33m%s\u001b[0m\u001b[33m'\u001b[0m\u001b[33m (\u001b[0m\u001b[33m%s\u001b[0m\u001b[33m)...\u001b[0m\u001b[33m\"\u001b[0m, name, \u001b[96mtype\u001b[0m(dataset).\u001b[91m__name__\u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2m347 \u001b[0m\u001b[2m│ │ \u001b[0m) \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2m348 \u001b[0m\u001b[2m│ │ \u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[31m❱ \u001b[0m349 \u001b[2m│ │ \u001b[0mresult = dataset.load() \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2m350 \u001b[0m\u001b[2m│ │ \u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2m351 \u001b[0m\u001b[2m│ │ \u001b[0m\u001b[94mreturn\u001b[0m result \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2m352 \u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2;33m/home/gwen/.local/lib/python3.10/site-packages/kedro/io/\u001b[0m\u001b[1;33mcore.py\u001b[0m:\u001b[94m196\u001b[0m in \u001b[92mload\u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2m193 \u001b[0m\u001b[2m│ │ │ \u001b[0mmessage = ( \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2m194 \u001b[0m\u001b[2m│ │ │ │ \u001b[0m\u001b[33mf\u001b[0m\u001b[33m\"\u001b[0m\u001b[33mFailed while loading data from data set \u001b[0m\u001b[33m{\u001b[0m\u001b[96mstr\u001b[0m(\u001b[96mself\u001b[0m)\u001b[33m}\u001b[0m\u001b[33m.\u001b[0m\u001b[33m\\n\u001b[0m\u001b[33m{\u001b[0m\u001b[96mstr\u001b[0m(exc)\u001b[33m}\u001b[0m\u001b[33m\"\u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2m195 \u001b[0m\u001b[2m│ │ │ \u001b[0m) \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[31m❱ \u001b[0m196 \u001b[2m│ │ │ \u001b[0m\u001b[94mraise\u001b[0m DataSetError(message) \u001b[94mfrom\u001b[0m \u001b[4;96mexc\u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2m197 \u001b[0m\u001b[2m│ \u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2m198 \u001b[0m\u001b[2m│ \u001b[0m\u001b[94mdef\u001b[0m \u001b[92msave\u001b[0m(\u001b[96mself\u001b[0m, data: _DI) -> \u001b[94mNone\u001b[0m: \u001b[31m│\u001b[0m\n", - "\u001b[31m│\u001b[0m \u001b[2m199 \u001b[0m\u001b[2m│ │ \u001b[0m\u001b[33m\"\"\"Saves data by delegation to the provided save method.\u001b[0m \u001b[31m│\u001b[0m\n", - "\u001b[31m╰──────────────────────────────────────────────────────────────────────────────────────────────────╯\u001b[0m\n", - "\u001b[1;91mDataSetError: \u001b[0mFailed while loading data from data set \u001b[1;35mXMLHousesReflector\u001b[0m\u001b[1m(\u001b[0m\u001b[33mname\u001b[0m=\u001b[35mmy\u001b[0m own dataset\u001b[1m)\u001b[0m.\n", - "exceptions must derive from BaseException\n" - ] - }, - "metadata": {}, - "output_type": "display_data" - } - ], - "source": [ - "catalog.load(\"xmlreflector\")" - ] - }, - { - "cell_type": "code", - "execution_count": 38, - "id": "dc290e93", - "metadata": {}, - "outputs": [ - { - "data": { - "text/html": [ - "
[06/16/23 15:56:44] INFO     Loading data from 'actors' (CSVDataSet)...                         data_catalog.py:345\n",
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\n", - "\n", - "\n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - " \n", - "
NAMEROLEHOUSEDATE1DATE2DATE3
0Charles Ier de BourbonprinceBourbon14001434.01456.0
1Gort, ÉtiennesecretBourbon14251440.0NaN
2ErartsecretBerry14041405.0NaN
3Jean de BerryprinceBerry13371360.01416.0
4Agnès de BourgogneprinceBourbon14071434.01476.0
\n", - "
" - ], - "text/plain": [ - " NAME ROLE HOUSE DATE1 DATE2 DATE3\n", - "0 Charles Ier de Bourbon prince Bourbon 1400 1434.0 1456.0\n", - "1 Gort, Étienne secret Bourbon 1425 1440.0 NaN\n", - "2 Erart secret Berry 1404 1405.0 NaN\n", - "3 Jean de Berry prince Berry 1337 1360.0 1416.0\n", - "4 Agnès de Bourgogne prince Bourbon 1407 1434.0 1476.0" - ] - }, - "execution_count": 38, - "metadata": {}, - "output_type": "execute_result" - } - ], - "source": [ - "catalog.load(\"actors\").head()" - ] - }, - { - "cell_type": "code", - "execution_count": 5, - "id": "eedbc7fb", - "metadata": {}, - "outputs": [ - { - "data": { - "text/plain": [ - "['actors', 'corpus-agnes-bourgogne', 'corpus-charles-i', 'parameters']" - ] - }, - "execution_count": 5, - "metadata": {}, - "output_type": "execute_result" - } - ], - "source": [ - "catalog.list()" - ] - }, - { - "cell_type": "code", - "execution_count": 20, - "id": "3168935f", - "metadata": {}, - "outputs": [ - { - "data": { - "text/html": [ - "
[06/16/23 14:58:30] INFO     Loading data from 'actors' (CSVDataSet)...                         data_catalog.py:345\n",
-       "
\n" - ], - "text/plain": [ - "\u001b[2;36m[06/16/23 14:58:30]\u001b[0m\u001b[2;36m \u001b[0m\u001b[34mINFO \u001b[0m Loading data from \u001b[32m'actors'\u001b[0m \u001b[1m(\u001b[0mCSVDataSet\u001b[1m)\u001b[0m\u001b[33m...\u001b[0m \u001b]8;id=659228;file:///media/gwen/maxtor/gwen/entrepot/cnrs/nicolas/depot/datascience/.venv/lib/python3.9/site-packages/kedro/io/data_catalog.py\u001b\\\u001b[2mdata_catalog.py\u001b[0m\u001b]8;;\u001b\\\u001b[2m:\u001b[0m\u001b]8;id=160900;file:///media/gwen/maxtor/gwen/entrepot/cnrs/nicolas/depot/datascience/.venv/lib/python3.9/site-packages/kedro/io/data_catalog.py#345\u001b\\\u001b[2m345\u001b[0m\u001b]8;;\u001b\\\n" - ] - }, - "metadata": {}, - "output_type": "display_data" - }, - { - "data": { - "text/plain": [ - "['NAME', 'ROLE', 'HOUSE', 'DATE1', 'DATE2', 'DATE3']" - ] - }, - "execution_count": 20, - "metadata": {}, - "output_type": "execute_result" - } - ], - "source": [ - "actors = catalog.load(\"actors\")\n", - "actors.columns.tolist()" - ] - }, - { - "cell_type": "markdown", - "id": "902dd387", - "metadata": {}, - "source": [ - "## Nettoyage des valeurs non renseignées\n", - "\n", - "Ligne d'origine (ligne 9) : \n", - "`\"René d'Anjou\";\"prince\";\"Anjou\";\"XXXX\";\"XXXX\";\"XXXX\"`\n" - ] - }, - { - "cell_type": "code", - "execution_count": 37, - "id": "24fc62ce", - "metadata": {}, - "outputs": [ - { - "data": { - "text/plain": [ - "NAME Bernard d'Armagnac\n", - "ROLE prince\n", - "HOUSE Armagnac\n", - "DATE1 NaN\n", - "DATE2 NaN\n", - "DATE3 NaN\n", - "Name: 9, dtype: object" - ] - }, - "execution_count": 37, - "metadata": {}, - "output_type": "execute_result" - } - ], - "source": [ - "#actors.values\n", - "import numpy as np\n", - "cleaned_actors = actors.replace(\"XXXX\", np.NaN)\n", - "actors.head()\n", - "#actors.values\n", - "cleaned_actors.iloc[9]" - ] - }, - { - "cell_type": "markdown", - "id": "ee287f62", - "metadata": {}, - "source": [ - "## Autres catalogues" - ] - }, - { - "cell_type": "code", - "execution_count": 1, - "id": "053ed17c", - "metadata": {}, - "outputs": [ - { - "data": { - "text/plain": [ - "['actors',\n", - " 'corpus-agnes-bourgogne',\n", - " 'corpus-charles-i',\n", - " 'dataset_test',\n", - " 'preprocessed_dataset_test',\n", - " 'load_xml',\n", - " 'preprocess_html',\n", - " 'load_full_xml_catalog',\n", - " 'preprocess_full_catalog_html',\n", - " 'preprocessed_actors',\n", - " 'parameters',\n", - " 'params:xlststylesheet']" - ] - }, - "execution_count": 1, - "metadata": {}, - "output_type": "execute_result" - } - ], - "source": [ - "catalog.list()" - ] - }, - { - "cell_type": "code", - "execution_count": 2, - "id": "660b898c", - "metadata": {}, - "outputs": [ - { - "data": { - "text/html": [ - "
[06/20/23 16:44:19] INFO     Loading data from 'load_xml' (XMLDataSet)...                       data_catalog.py:345\n",
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[06/22/23 15:01:39] INFO     Loading data from 'load_full_xml_catalog' (PartitionedDataSet)...  data_catalog.py:345\n",
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                    INFO     Loading data from 'load_full_xml_catalog' (PartitionedDataSet)...  data_catalog.py:345\n",
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" 'anj_lo_ii_1406_04_15a': >,\n", - " 'anj_lo_ii_1409_08_07a': >,\n", - " 'anj_lo_ii_1409_12_12a': >,\n", - " 'anj_lo_ii_1413_03_01a': >,\n", - " 'anj_lo_iii_1420_11_04a': >,\n", - " 'anj_lo_iii_1422_02_09a': >,\n", - " 'anj_lo_iii_1424_03_31a': >,\n", - " 'anj_lo_iii_1424_03_31b': >,\n", - " 'anj_lo_iii_1428_06_07a': >,\n", - " 'anj_lo_iii_1428_06_07b': >,\n", - " 'anj_lo_iii_1432_10_27a': >,\n", - " 'anj_ma_i_1370_12_10a': >,\n", - " 'anj_re_i_1437_09_16a': >,\n", - " 'anj_re_i_1439_11_22a': >,\n", - " 'anj_re_i_1440_01_20a': >,\n", - " 'anj_re_i_1445a': >,\n", - " 'anj_re_i_1450_11_07a': >,\n", - " 'anj_re_i_1454_01_14a': >,\n", - " 'anj_re_i_1454_02_09a': >,\n", - " 'anj_re_i_1454_06_17a': >,\n", - " 'anj_re_i_1454_09_01a': >,\n", - " 'anj_re_i_1455_11_13a': >,\n", - " 'anj_re_i_1456_11_29a': >,\n", - " 'anj_re_i_1457_01_04a': >,\n", - " 'anj_re_i_1459_03_17a': >,\n", - " 'anj_re_i_1459_04_16a': >,\n", - " 'anj_re_i_1463_07_21a': >,\n", - " 'anj_re_i_1466_12_16a': >,\n", - " 'anj_re_i_1474_02_01a': >,\n", - " 'anj_re_i_1475_05_26a': >,\n", - " 'anj_yo_i_1418_12_20a': >,\n", - " 'anj_yo_i_1421_06_28a': >,\n", - " 'anj_yo_i_1442_02_24a': >}" - ] - }, - "execution_count": 1, - "metadata": {}, - "output_type": "execute_result" - } - ], - "source": [ - "partitions = catalog.load('load_full_xml_catalog')\n", - "catalog.load('load_full_xml_catalog')" - ] - }, - { - "cell_type": "code", - "execution_count": 4, - "id": "bdc37079", - "metadata": {}, - "outputs": [ - { - "data": { - "text/plain": [ - ">" - ] - }, - "execution_count": 4, - "metadata": {}, - "output_type": "execute_result" - } - ], - "source": [ - "partitions['anj_is_i_1441_08_05a']" - ] - } - ], - "metadata": { - "kernelspec": { - "display_name": "Kedro (actes_princiers)", - "language": "python", - "name": "kedro_actes_princiers" - }, - "language_info": { - "codemirror_mode": { - "name": "ipython", - "version": 3 - }, - "file_extension": ".py", - "mimetype": "text/x-python", - "name": "python", - "nbconvert_exporter": "python", - "pygments_lexer": "ipython3", - "version": "3.9.2" - } - }, - "nbformat": 4, - "nbformat_minor": 5 -} diff --git a/actes-princiers/pyproject.toml b/actes-princiers/pyproject.toml deleted file mode 100644 index 816f869..0000000 --- a/actes-princiers/pyproject.toml +++ /dev/null @@ -1,17 +0,0 @@ -[tool.kedro] -package_name = "actes_princiers" -project_name = "Actes Princiers" -kedro_init_version = "0.18.10" - -[tool.isort] -profile = "black" - -[tool.pytest.ini_options] -addopts = """ ---cov-report term-missing \ ---cov src/actes_princiers -ra""" - -[tool.coverage.report] -fail_under = 0 -show_missing = true -exclude_lines = ["pragma: no cover", "raise NotImplementedError"] diff --git a/actes-princiers/setup.cfg b/actes-princiers/setup.cfg deleted file mode 100644 index 63ea673..0000000 --- a/actes-princiers/setup.cfg +++ /dev/null @@ -1,3 +0,0 @@ -[flake8] -max-line-length=88 -extend-ignore=E203 diff --git a/actes-princiers/src/actes_princiers/__init__.py b/actes-princiers/src/actes_princiers/__init__.py deleted file mode 100644 index 0985307..0000000 --- a/actes-princiers/src/actes_princiers/__init__.py +++ /dev/null @@ -1,4 +0,0 @@ -"""Actes Princiers -""" - -__version__ = "0.1" diff --git a/actes-princiers/src/actes_princiers/__main__.py b/actes-princiers/src/actes_princiers/__main__.py deleted file mode 100644 index 47fa095..0000000 --- a/actes-princiers/src/actes_princiers/__main__.py +++ /dev/null @@ -1,47 +0,0 @@ -"""Actes Princiers file for ensuring the package is executable -as `actes-princiers` and `python -m actes_princiers` -""" -import importlib -from pathlib import Path - -from kedro.framework.cli.utils import KedroCliError, load_entry_points -from kedro.framework.project import configure_project - - -def _find_run_command(package_name): - try: - project_cli = importlib.import_module(f"{package_name}.cli") - # fail gracefully if cli.py does not exist - except ModuleNotFoundError as exc: - if f"{package_name}.cli" not in str(exc): - raise - plugins = load_entry_points("project") - run = _find_run_command_in_plugins(plugins) if plugins else None - if run: - # use run command from installed plugin if it exists - return run - # use run command from `kedro.framework.cli.project` - from kedro.framework.cli.project import run - - return run - # fail badly if cli.py exists, but has no `cli` in it - if not hasattr(project_cli, "cli"): - raise KedroCliError(f"Cannot load commands from {package_name}.cli") - return project_cli.run - - -def _find_run_command_in_plugins(plugins): - for group in plugins: - if "run" in group.commands: - return group.commands["run"] - - -def main(*args, **kwargs): - package_name = Path(__file__).parent.name - configure_project(package_name) - run = _find_run_command(package_name) - run(*args, **kwargs) - - -if __name__ == "__main__": - main() diff --git a/actes-princiers/src/actes_princiers/customcontext.py b/actes-princiers/src/actes_princiers/customcontext.py deleted file mode 100644 index f94f9f1..0000000 --- a/actes-princiers/src/actes_princiers/customcontext.py +++ /dev/null @@ -1,38 +0,0 @@ -#from typing import Dict - -from kedro.framework.context import KedroContext - -class ProjectContext(KedroContext): - project_name = "actes princiers" - project_version = "0.1" - package_name = "actes_princiers" - -# def get_params(self): -# houses = self.config_loader.get("params*") -# return params - -# def get_houses(self): -# """loading from generic configuration file -# (that is, the global houses `houses.yaml`)""" -# houses = self.config_loader.get("houses*") -# return houses['houses'] - -# def get_houses_datapath(self): -# """loading from generic configuration file""" -# houses = self.config_loader.get("houses*") -# return houses['raw_datapath'] - -# def get_catalog(self): -# "catalog loader entry point" -# # loading yaml defined catalogs -# catalog = self.config_loader.get('catalog*') -# return catalog - -# def _get_catalog(self, *args, **kwargs): -# "catalog loader entry point" -# # loading yaml defined catalogs -# catalog = super()._get_catalog(*args, **kwargs) -# # kedro.io.data_catalog.DataCatalog -# # adding data sets -# self.nodes_description = self._house_dataset_loader(catalog) -# return catalog diff --git a/actes-princiers/src/actes_princiers/pipeline_registry.py b/actes-princiers/src/actes_princiers/pipeline_registry.py deleted file mode 100644 index 2109a75..0000000 --- a/actes-princiers/src/actes_princiers/pipeline_registry.py +++ /dev/null @@ -1,16 +0,0 @@ -"""Project pipelines.""" -from __future__ import annotations - -from kedro.framework.project import find_pipelines -from kedro.pipeline import Pipeline - - -def register_pipelines() -> dict[str, Pipeline]: - """Register the project's pipelines. - - Returns: - A mapping from pipeline names to ``Pipeline`` objects. - """ - pipelines = find_pipelines() - pipelines["__default__"] = sum(pipelines.values()) - return pipelines diff --git a/actes-princiers/src/actes_princiers/pipelines/__init__.py b/actes-princiers/src/actes_princiers/pipelines/__init__.py deleted file mode 100644 index e69de29..0000000 diff --git a/actes-princiers/src/actes_princiers/pipelines/populate_mongo/__init__.py b/actes-princiers/src/actes_princiers/pipelines/populate_mongo/__init__.py deleted file mode 100755 index e08ea5f..0000000 --- a/actes-princiers/src/actes_princiers/pipelines/populate_mongo/__init__.py +++ /dev/null @@ -1,3 +0,0 @@ -"Data Processing pipeline" - -from .pipeline import create_pipeline # NOQA diff --git a/actes-princiers/src/actes_princiers/pipelines/populate_mongo/nodes.py b/actes-princiers/src/actes_princiers/pipelines/populate_mongo/nodes.py deleted file mode 100755 index 235f6e1..0000000 --- a/actes-princiers/src/actes_princiers/pipelines/populate_mongo/nodes.py +++ /dev/null @@ -1,130 +0,0 @@ -import logging -import urllib.parse - -from pathlib import Path -from typing import Dict - -from mongoengine import connect -from mongoengine import Document, StringField, DictField, ListField -#import folium - -from kedro.framework.session import KedroSession -from kedro.extras.datasets.yaml import YAMLDataSet -from kedro.extras.datasets.json import JSONDataSet - -from actesdataset import JSONDataSetCollection - - -logger = logging.getLogger(__name__) - - -#class FoliumMap(Document): -# globalmap = StringField(required=True) - - -class Helpers(Document): - house_trigram = DictField() - prince_bigram = DictField() - - -# Database schemas -class House(Document): - "_id is the name" - _id = StringField(required=True, max_length=100) - name = StringField(required=True, max_length=100) - trigram = StringField(required=True, max_length=3) - particle = StringField(required=True, max_length=150) - - -class Acte(Document): - """_id is the filename""" - _id = StringField(required=True, max_length=150) - house = StringField(required=True, max_length=100) - prince_name = StringField(required=True, max_length=150) - prince_code = StringField(required=True, max_length=100) - analysis = StringField(required=True, max_length=3000) - date = StringField(required=True, max_length=250) - transcribers = ListField(required=True) - # FIXME date_teim type shal it be a **real** date object ? - date_time = StringField(required=True, max_length=15) - filename = StringField(required=True, max_length=100) - ref_acte = StringField(required=True, max_length=100) - xmlcontent = StringField(required=True) # no max_length - place = DictField() - folium = StringField(required=False) # no max_length - - -def db_connect(storage_ip, db_name, mongodb_admin, mongodb_password): - #mongodb://%s:%s@149.202.41.75:27017' % (username, password) - username = urllib.parse.quote_plus(mongodb_admin) - password = urllib.parse.quote_plus(mongodb_password) - mongodb_url = f"mongodb://{username}:{password}@{storage_ip}:27017/" - #mongodb_url = "mongodb://{}:27017/".format(storage_ip) - #logger.info("connection to the mongodb server") - # pymongo settings - # myclient = pymongo.MongoClient(mongodb_url) - myclient = connect(db=db_name, host=mongodb_url, authentication_source='admin', alias="default") - - -# pipeline functions -def populate_mongo(jsondoc: JSONDataSetCollection, storage_ip: str, db_name: str, db_collection_name: str, mongodb_admin: str, mongodb_password: str) -> None: - "loads the json for an acte" - jsondatasets = jsondoc.datasets - housename = jsondoc._housename - - db_connect(storage_ip, db_name, mongodb_admin, mongodb_password) - - #places = [] - - for dataset_filenamestem, dataset in jsondatasets.items(): - # a manual load is required here, because - # the dataset **is not** registered in kedro's catalog - json_document = dataset._load() - json_document["_id"] = json_document["filename"] - acte_entry = Acte(**json_document) - logger.info("... adding entry: " + json_document["filename"]) - acte_entry.save() - - ## place location in the folium global map - #if json_document['place'].get('latitude') is not None: - # places.append(json_document['place']) - - # folium global map - # add to mongo db - #m = folium.Map(location=[46.603354, 1.888334], zoom_start=6) - #folium.TileLayer(name="Géolocalisation des actes",control=False).add_to(m) - #for place in places: - # folium.Marker( - # location=[float(place['latitude']), float(place['longitude'])], - # popup=place['name'] - # #icon=folium.Icon(icon="cloud") - # #icon=folium.Icon(color='lightgray', icon='home', prefix='fa') - # ).add_to(m) - #globalmap = m.get_root()._repr_html_() - ##globalmap = m._repr_html_() - #folium_map = FoliumMap(globalmap=globalmap) - #folium_map.save() - - return - - -def load_houses(yamldoc: YAMLDataSet, storage_ip: str, db_name: str, mongodb_admin: str, mongodb_password: str) -> None: - - db_connect(storage_ip, db_name, mongodb_admin, mongodb_password) - - for house_dict in yamldoc['houses'].values(): - house_dict['_id'] = house_dict['name'] - #houses_col.insert_one(house_dict) - house_entry = House(**house_dict) - house_entry.save() - - return - -def load_helpers(house_trigram: JSONDataSet, prince_bigram: JSONDataSet, - storage_ip: str, db_name: str, mongodb_admin: str, mongodb_password: str) -> None: - - db_connect(storage_ip, db_name, mongodb_admin, mongodb_password) - - helper_entry = Helpers(house_trigram=house_trigram, prince_bigram=prince_bigram) - helper_entry.save() - diff --git a/actes-princiers/src/actes_princiers/pipelines/populate_mongo/pipeline.py b/actes-princiers/src/actes_princiers/pipelines/populate_mongo/pipeline.py deleted file mode 100755 index 518c9f0..0000000 --- a/actes-princiers/src/actes_princiers/pipelines/populate_mongo/pipeline.py +++ /dev/null @@ -1,55 +0,0 @@ -from kedro.pipeline import Pipeline, node, pipeline - -from .nodes import populate_mongo, load_houses, load_helpers - - -def create_pipeline(**kwargs) -> Pipeline: - return pipeline( - [ - node( - func=populate_mongo, - inputs=["bourbon_fulljsonoutput", "params:storage_ip", "params:db_name", - "params:db_collection_name", "params:mongodb_admin", - "params:mongodb_password"], - outputs=None, - name="populate_actes", - tags="populate_database", - ), - node( - func=populate_mongo, - inputs=["berry_fulljsonoutput", "params:storage_ip", "params:db_name", - "params:db_collection_name", "params:mongodb_admin", - "params:mongodb_password"], - outputs=None, - name="populate_actes", - tags="populate_database", - ), - node( - func=populate_mongo, - inputs=["anjou_fulljsonoutput", "params:storage_ip", "params:db_name", - "params:db_collection_name", "params:mongodb_admin", - "params:mongodb_password"], - outputs=None, - name="populate_actes", - tags="populate_database", - ), - node( - func=load_houses, - inputs=["houses", "params:storage_ip", "params:db_name", - "params:mongodb_admin", "params:mongodb_password"], - outputs=None, - name="polulate_houses", - tags="populate_database", - ), - node( - func=load_helpers, - inputs=["houses_trigram","prince_bigram", - "params:storage_ip", "params:db_name", - "params:mongodb_admin", "params:mongodb_password"], - outputs=None, - name="populate_helpers", - tags="populate_database", - ) - ] - ) - diff --git a/actes-princiers/src/actes_princiers/pipelines/xml_processing/__init__.py b/actes-princiers/src/actes_princiers/pipelines/xml_processing/__init__.py deleted file mode 100755 index e08ea5f..0000000 --- a/actes-princiers/src/actes_princiers/pipelines/xml_processing/__init__.py +++ /dev/null @@ -1,3 +0,0 @@ -"Data Processing pipeline" - -from .pipeline import create_pipeline # NOQA diff --git a/actes-princiers/src/actes_princiers/pipelines/xml_processing/nodes.py b/actes-princiers/src/actes_princiers/pipelines/xml_processing/nodes.py deleted file mode 100755 index be36345..0000000 --- a/actes-princiers/src/actes_princiers/pipelines/xml_processing/nodes.py +++ /dev/null @@ -1,110 +0,0 @@ -import logging -from pathlib import Path -from typing import Dict - -import folium -from kedro.framework.session import KedroSession - -from actesdataset import EtreeXMLDataSet, BsXMLDataSet, JSONDataSet -from actesdataset import (XMLDataSetCollection, BsXMLDataSetCollection, - JSONDataSetCollection, TextDataSetCollection) - -logger = logging.getLogger(__name__) - -with KedroSession.create() as session: - context = session.load_context() -# catalog = context.get_catalog() - -def parse_xml_collection(datasetcol: XMLDataSetCollection) -> XMLDataSetCollection: - "node function entry point, performs batch processing" - datasets = datasetcol.datasets - housename = datasetcol._housename - output_datasets = context.catalog.load(housename + '_xmlcontent') - outputfolderpath = output_datasets._folderpath - for dataset_filenamestem, dataset in datasets.items(): - # a manual load is required here, because - # the dataset **is not** registered in kedro's catalog - dataset._load() - output_source_doc = dataset.transform() - # set dataset's output filepath - output_filepath = outputfolderpath / Path(dataset_filenamestem).with_suffix(".pseudoxml") - output_xmldataset = EtreeXMLDataSet(str(output_filepath), output_datasets.xsltstylesheet) - # let's create subfolders, if they don't exist - output_xmldataset_dir = output_filepath.parent - output_xmldataset_dir.mkdir(parents=True, exist_ok=True) - # save on file - output_xmldataset._save(output_source_doc) - output_datasets.datasets[dataset_filenamestem] = output_xmldataset - return output_datasets - - -def make_json_collection(datasetcol: BsXMLDataSetCollection) -> JSONDataSetCollection: - "node function entry point, performs batch processing" - datasets = datasetcol.datasets - housename = datasetcol._housename - - output_datasets = context.catalog.load(housename + '_jsonoutput') - outputfolderpath = output_datasets._folderpath - for dataset_filenamestem, dataset in datasets.items(): - #logger.info("filestem:" + dataset_filenamestem) - # a manual load is required here, because - # the dataset **is not** registered in kedro's catalog - dataset._load() - output_source_doc = dataset.transform() - # let's add the house into the JSONDataSet, could be usefull - output_source_doc['house'] = housename - # set dataset's output filepath - output_filepath = outputfolderpath / Path(dataset_filenamestem).with_suffix(".json") - output_xmldataset = JSONDataSet(str(output_filepath)) - # let's create subfolders, if they don't exist - output_xmldataset_dir = output_filepath.parent - output_xmldataset_dir.mkdir(parents=True, exist_ok=True) - # save on file - output_xmldataset._save(output_source_doc) - output_datasets.datasets[dataset_filenamestem] = output_xmldataset - return output_datasets - -def _make_map(latitude, longitude, popup): - m = folium.Map(location=[latitude, longitude], zoom_start=12, - width=800, - height=600, - ) - folium.Marker( - location=[latitude, longitude], - popup=popup, - icon=folium.Icon(color='lightgray', icon="circle", prefix='fa') - ).add_to(m) - return m.get_root()._repr_html_() - -def add_xmlcontent_tojson(jsondoc: JSONDataSetCollection, xmlcontent: TextDataSetCollection) -> JSONDataSetCollection: - "adds xmlcontent to the json" - jsondatasets = jsondoc.datasets - housename = jsondoc._housename - output_datasets = context.catalog.load(housename + '_fulljsonoutput') - outputfolderpath = output_datasets._folderpath - xmldatasets = xmlcontent.datasets - for dataset_filenamestem, dataset in jsondatasets.items(): - document = dataset._load() - output_filepath = outputfolderpath / Path(dataset_filenamestem).with_suffix(".json") - output_xmldataset = JSONDataSet(str(output_filepath)) - # json dict update with xmlcontent - if dataset_filenamestem in xmldatasets: - xmlds = xmldatasets[dataset_filenamestem] -# xmlds._load() - document['xmlcontent'] = xmldatasets[dataset_filenamestem]._load() - if document['place']['latitude'] is not None: - document['folium'] = _make_map(document['place']['latitude'], - document['place']['longitude'], - document['place']['name']) - else: - document['folium'] = None - else: - raise KeyError(f"xmlcontent datasets does not have the key : {dataset_filenamestem}") - # let's create subfolders, if they don't exist - output_xmldataset_dir = output_filepath.parent - output_xmldataset_dir.mkdir(parents=True, exist_ok=True) - # save on file - output_xmldataset._save(document) - output_datasets.datasets[dataset_filenamestem] = output_xmldataset - return output_datasets - diff --git a/actes-princiers/src/actes_princiers/pipelines/xml_processing/pipeline.py b/actes-princiers/src/actes_princiers/pipelines/xml_processing/pipeline.py deleted file mode 100755 index aa49953..0000000 --- a/actes-princiers/src/actes_princiers/pipelines/xml_processing/pipeline.py +++ /dev/null @@ -1,80 +0,0 @@ - -from kedro.pipeline import Pipeline, node, pipeline - -from .nodes import (parse_xml_collection, make_json_collection, - add_xmlcontent_tojson) - - -def create_pipeline(**kwargs) -> Pipeline: - return pipeline( - [ - # bourbon - node( - func=parse_xml_collection, - inputs=["bourbon"], - outputs="bourbon_xmlcontent", - name="bourbon_ds_collection", - tags="etl_transform" - ), - node( - func=make_json_collection, - inputs="bourbon_json", - outputs="bourbon_jsonoutput", - name="bourbon_json_ds_collection", - tags="etl_transform" - ), - node( - func=add_xmlcontent_tojson, - inputs=["bourbon_jsonoutput", "bourbon_pseudoxmlcontent"], - outputs="bourbon_fulljsonoutput", - name="bourbon_fulljson_ds_collection", - tags="etl_transform" - ), - # berry - node( - func=parse_xml_collection, - inputs=["berry"], - outputs="berry_xmlcontent", - name="berry_ds_collection", - tags="etl_transform" - ), - node( - func=make_json_collection, - inputs="berry_json", - outputs="berry_jsonoutput", - name="berry_json_ds_collection", - tags="etl_transform" - ), - node( - func=add_xmlcontent_tojson, - inputs=["berry_jsonoutput", "berry_pseudoxmlcontent"], - outputs="berry_fulljsonoutput", - name="berry_fulljson_ds_collection", - tags="etl_transform" - ), - # anjou - node( - func=parse_xml_collection, - inputs=["anjou"], - outputs="anjou_xmlcontent", - name="anjou_ds_collection", - tags="etl_transform" - ), - node( - func=make_json_collection, - inputs="anjou_json", - outputs="anjou_jsonoutput", - name="anjou_json_ds_collection", - tags="etl_transform" - ), - node( - func=add_xmlcontent_tojson, - inputs=["anjou_jsonoutput", "anjou_pseudoxmlcontent"], - outputs="anjou_fulljsonoutput", - name="anjou_fulljson_ds_collection", - tags="etl_transform" - ), - - ] - ) - diff --git a/actes-princiers/src/actes_princiers/settings.py b/actes-princiers/src/actes_princiers/settings.py deleted file mode 100644 index 2ad0cfe..0000000 --- a/actes-princiers/src/actes_princiers/settings.py +++ /dev/null @@ -1,42 +0,0 @@ -"""Project settings. There is no need to edit this file unless you want to change values -from the Kedro defaults. For further information, including these default values, see -https://kedro.readthedocs.io/en/stable/kedro_project_setup/settings.html.""" - -# Instantiated project hooks. -# For example, after creating a hooks.py and defining a ProjectHooks class there, do -# from actes_princiers.hooks import ProjectHooks -# HOOKS = (ProjectHooks(),) - -# Installed plugins for which to disable hook auto-registration. -# DISABLE_HOOKS_FOR_PLUGINS = ("kedro-viz",) - -# Class that manages storing KedroSession data. -# from kedro.framework.session.store import BaseSessionStore -# SESSION_STORE_CLASS = BaseSessionStore -# Keyword arguments to pass to the `SESSION_STORE_CLASS` constructor. -# SESSION_STORE_ARGS = { -# "path": "./sessions" -# } - -# Directory that holds configuration. -# CONF_SOURCE = "conf" - -# Class that manages how configuration is loaded. -from kedro.config import OmegaConfigLoader -CONFIG_LOADER_CLASS = OmegaConfigLoader -# Keyword arguments to pass to the `CONFIG_LOADER_CLASS` constructor. -# CONFIG_LOADER_ARGS = { -# "config_patterns": { -# "spark" : ["spark*/"], -# "parameters": ["parameters*", "parameters*/**", "**/parameters*"], -# } -# } - -# Class that manages Kedro's library components. -# from kedro.framework.context import KedroContext -#from .customcontext import ProjectContext -#CONTEXT_CLASS = ProjectContext - -# Class that manages the Data Catalog. -# from kedro.io import DataCatalog -# DATA_CATALOG_CLASS = DataCatalog diff --git a/actes-princiers/src/actesdataset.py b/actes-princiers/src/actesdataset.py deleted file mode 100644 index 976d813..0000000 --- a/actes-princiers/src/actesdataset.py +++ /dev/null @@ -1,315 +0,0 @@ -import logging -import json -from typing import Dict, Any -from pathlib import Path -from abc import ABC, abstractmethod - - -from lxml import etree -from bs4 import BeautifulSoup - -from kedro.io import AbstractDataSet, DataSetError -from kedro.framework.session import KedroSession - -logger = logging.getLogger(__name__) - - -class XMLDataSet(ABC): - "Abstract base class for an XML dataset loader" - - def __init__(self, filepath: str) -> None: - self._filepath = filepath - - @property - def filepath(self) -> str: - "xml file's filename getters" - return self._filepath - - def _describe(self) -> Dict[str, Any]: - "kedro's API-like repr()" - return dict(filepath=self._filepath) - - @abstractmethod - def _load(self): - pass - - def _save(self, data:str) -> None: - pass - -class EtreeXMLDataSet(XMLDataSet): - "XMLDataSet loader with lxml.etree (lxml.etree._ElementTree)" - - def __init__(self, filepath, params): - self._filepath = filepath - self.xsltstylesheet = params - - def _load(self): - "from the xml file loads a internal xml repr (with element tree)" - # self.source_doc is an etree internal xml repr document - self.source_doc = etree.parse(self._filepath) - # removing namespace - query = "descendant-or-self::*[namespace-uri()!='']" - for element in self.source_doc.xpath(query): - #replacing element name with its local name - element.tag = etree.QName(element).localname - etree.cleanup_namespaces(self.source_doc) - - def _save(self, data:str) -> None: - "kedro's API-like saver" - with open(self._filepath, 'w') as fhandle: - fhandle.write(data) - - @staticmethod - def _xslt(xsltstylesheet): - "performs XML transformation on each dataset" - xslt_doc = etree.parse(xsltstylesheet) - xslt_transformer = etree.XSLT(xslt_doc) - return xslt_transformer - - def transform(self): - xslt_transformer = self._xslt(self.xsltstylesheet) - return str(xslt_transformer(self.source_doc)) - -class BsXMLDataSet(XMLDataSet): - "XMLDataSet loader with BeautifulSoup" - - def _load(self): - "from the xml file, loads a internal xml repr (with bsoup)" - with open(self._filepath, 'r', encoding="utf-8") as fhandle: - self.soup = BeautifulSoup(fhandle, 'xml') - ## xml.prettify() is the bsoup str(source_doc) - - def _save(self, data: Dict) -> None: - "kedro's API-like saver" - with open(self._filepath, 'w') as fp: - json.dump(data, fp, sort_keys=True, indent=4) - - def find_transcribers(self): - "find transcriber xml bs4 helper" - transcribers = self.soup.find_all('respStmt') - trs = [] - for pers in transcribers: - trs_name = pers.find('name') - if trs_name: - trs.append(trs_name.get_text()) - return trs - - def find_prince_name(self): - """find prince_name xml bs4 helper - - prince_name = tree.xpath('//listPerson[@type="prince"]/person/name/text()') - """ - person = self.soup.find("listPerson", {'type': "prince"} ) - ps = person.find('name') - prince_name = ps.get_text() - return prince_name - - def make_prince_code_from_filestem(self, filestem): - """ - builds prince code - - :param: filestem - sample: "anj_isa_i_1441_08_05a" - :return: prince code, sample: "isa_i" - """ - # cut with the underscores - cut = filestem.split('_') - # remove house and date - prince_code = "_".join(cut[1:3]) - return prince_code - - def transform(self): - #soup = make_soup(os.path.join(folder, acte)) - # 1.1/ Get all data from XML (9). counter is the id (= numb_acte) - numb = self.soup.TEI["xml:id"] # /TEI[@xml:id] is always the acte's ID - date_time = self.soup.msItem.docDate["when"] # YYYY-MM-DD or YYYY-MM date - date = self.soup.msItem.docDate.text # verbose date - analyse = self.soup.abstract.p.text # acte's short analysis - ref = self.soup.msIdentifier.find_all("idno", {"n": "2"}) - if len(ref) > 0: # there is an analysis - ref_acte = ref[0].text - else: # there is no analysis - ref_acte = "NS" - # //sourceDesc//msIdentifier/idno[@n='2'] is the doc id inside the - # archive box or the page number inside a manuscript (see _create_doc) - # warning: the analysis may not have been written yet, - # which would result in List Index Out of Range Error. Hence: - # //sourceDesc//msIdentifier/idno[@n='1'] is always the - # archive box or manuscript collection id - #doc = self.soup.msIdentifier.find_all("idno", {"n": "1"})[0] - #type_diplo = self.soup.body.div["subtype"] - #diplo_state = self.soup.body.div["type"] - - # geolocalisation - place = self.soup.find("place") - place_name = place.find("placeName") - if place_name.get_text() != "NS": - pl_name = place_name.get_text() - else: - pl_name = "Non spécifié" - - region_balise = place.find("region") - if region_balise is not None: - region = region_balise.get_text() - else: - region = "Non spécifié" - - settlement = place.find("settlement") - if settlement is not None: - settlement = settlement.get_text() - else: - settlement = "Non spécifié" - - geolocalisation = place.find("geo") - if geolocalisation is not None: - geolocalisation = geolocalisation.get_text() - latitude, longitude = geolocalisation.split(" ") - else: - latitude = None - longitude = None - - place = dict(name=pl_name, - region=region, - settlement=settlement, - latitude = latitude, - longitude = longitude - ) - - return { -# "num_acte": counter, - "prince_name": self.find_prince_name(), - "prince_code": self.make_prince_code_from_filestem(numb), - "filename": numb, - "date_time": date_time, - "date": date, -# "prod_place_acte": place_query[0], - "analysis": analyse, -# "doc_acte": doc_query[0], - "ref_acte": ref_acte, - "transcribers": self.find_transcribers(), - "place": place -# "state_doc": state_query[0], -# "diplo_type_acte": diplo_query[0] - } - -class DataSetCollection(AbstractDataSet): - """Stores instances of ``DataSetCollection`` - implementations to provide ``_load`` and ``_save`` capabilities. - """ - def __init__(self, - housename: str, - folderpath: str) -> None: - self._housename = housename - self._folderpath = Path(folderpath) - # the collections key: file name, value: dataset object - self.datasets = dict() - - def _save(self, data) -> None: - """kedro's API saver method - -  There is **nothing to save**, because -  this dataset collections is a *container* dataset. - this method is here only because kedro requires it. -  """ - pass - - def _describe(self) -> dict[str, Any]: - "kedro's API repr()" - return dict(name=self._housename, - folderpath=str(self._folderpath)) - - -class XMLDataSetCollection(DataSetCollection): - def __init__(self, housename: str, - folderpath: str, xsltstylesheet: str) -> None: - super().__init__(housename, folderpath) - self.xsltstylesheet = xsltstylesheet - - def _load(self) -> dict[str, EtreeXMLDataSet]: - "kedro's API loader method" - for filepath in sorted(self._folderpath.glob("*.xml")): - self.datasets[filepath.stem] = EtreeXMLDataSet(str(filepath), self.xsltstylesheet) - return self - - -class BsXMLDataSetCollection(DataSetCollection): - def _load(self) -> dict[str, BsXMLDataSet]: - "kedro's API loader method" - self.datasets = dict() - for filepath in sorted(self._folderpath.glob("*.xml")): - self.datasets[filepath.stem] = BsXMLDataSet( - filepath=str(filepath)) - return self - - -class JSONDataSet: - def __init__(self, filepath: str): - self._filepath = filepath - - def _load(self) -> Dict: - with open(self._filepath, 'r') as fp: - return json.load(fp) - - def _save(self, data: Dict) -> None: - with open(self._filepath, 'w') as fp: - json.dump(data, fp, sort_keys=True, indent=4) - - def _describe(self) -> Dict[str, Any]: - return dict(filepath=self._filepath) - - -class JSONDataSetCollection(DataSetCollection): - def _load(self) -> dict[str, JSONDataSet]: - "kedro's API loader method" - self.datasets = dict() - for filepath in sorted(self._folderpath.glob("*.json")): - self.datasets[filepath.stem] = JSONDataSet( - filepath=str(filepath)) - return self - -class TextDataSet: - """loads/saves data from/to a text file using an underlying filesystem - example usage - >>> string_to_write = "This will go in a file." - >>> - >>> data_set = TextDataSet(filepath="test.md") - >>> data_set.save(string_to_write) - >>> reloaded = data_set.load() - >>> assert string_to_write == reloaded - """ - def __init__(self, filepath: str): - self._filepath = filepath - - def _load(self) -> str: - with open(self._filepath, 'r') as fhandle: - return fhandle.read() - - def _save(self, data: str) -> None: - with open(self._filepath, 'w') as fhandle: - fhandle.write(data) - - def _describe(self) -> Dict[str, Any]: - return dict(filepath=self._filepath) - -class TextDataSetCollection(DataSetCollection): - def _load(self) -> dict[str, JSONDataSet]: - "kedro's API loader method" - self.datasets = dict() - for filepath in sorted(self._folderpath.glob("*.pseudoxml")): - self.datasets[filepath.stem] = TextDataSet( - filepath=str(filepath)) - return self - -#class FoliumHTMLDataSet(AbstractDataSet): -# def __init__(self, filepath: str): -# self._filepath = filepath -# -# def _load(self) -> None: -# raise DataSetError('This dataset is WriteOnly') -# -# def _describe(self) -> Dict[str, Any]: -# return dict(filepath=self._filepath) -# -# def _save(self, data: Map) -> None: -# data.save(self._filepath) - diff --git a/actes-princiers/src/requirements.txt b/actes-princiers/src/requirements.txt deleted file mode 100644 index 832f671..0000000 --- a/actes-princiers/src/requirements.txt +++ /dev/null @@ -1,13 +0,0 @@ -beautifulsoup4==4.12.2 -python-slugify>=8.0.1 -ipython>=7.31.1, <8.0; python_version < '3.8' -ipython~=8.10; python_version >= '3.8' -isort~=5.0 -kedro~=0.18.12 -kedro-datasets~=1.7.0 -kedro-telemetry~=0.2.5 -lxml~=4.9.3 -nbstripout~=0.4 -pymongo~=4.5.0 -mongoengine~=0.27.0 -folium~=0.14.0 diff --git a/actes-princiers/src/setup.py b/actes-princiers/src/setup.py deleted file mode 100644 index 5aa2d70..0000000 --- a/actes-princiers/src/setup.py +++ /dev/null @@ -1,39 +0,0 @@ -from setuptools import find_packages, setup - -entry_point = ( - "actes-princiers = actes_princiers.__main__:main" -) - - -# get the dependencies and installs -with open("requirements.txt", encoding="utf-8") as f: - # Make sure we strip all comments and options (e.g "--extra-index-url") - # that arise from a modified pip.conf file that configure global options - # when running kedro build-reqs - requires = [] - for line in f: - req = line.split("#", 1)[0].strip() - if req and not req.startswith("--"): - requires.append(req) - -setup( - name="actes_princiers", - version="0.1", - packages=find_packages(exclude=["tests"]), - entry_points={"console_scripts": [entry_point]}, - install_requires=requires, - extras_require={ - "docs": [ - "docutils<0.18.0", - "sphinx~=3.4.3", - "sphinx_rtd_theme==0.5.1", - "nbsphinx==0.8.1", - "nbstripout~=0.4", - "sphinx-autodoc-typehints==1.11.1", - "sphinx_copybutton==0.3.1", - "ipykernel>=5.3, <7.0", - "Jinja2<3.1.0", - "myst-parser~=0.17.2", - ] - }, -) diff --git a/actes-princiers/src/tests/__init__.py b/actes-princiers/src/tests/__init__.py deleted file mode 100644 index e69de29..0000000 diff --git a/actes-princiers/src/tests/pipelines/__init__.py b/actes-princiers/src/tests/pipelines/__init__.py deleted file mode 100644 index e69de29..0000000 diff --git a/actes-princiers/src/tests/test_run.py b/actes-princiers/src/tests/test_run.py deleted file mode 100644 index c08b15b..0000000 --- a/actes-princiers/src/tests/test_run.py +++ /dev/null @@ -1,41 +0,0 @@ -""" -This module contains an example test. - -Tests should be placed in ``src/tests``, in modules that mirror your -project's structure, and in files named test_*.py. They are simply functions -named ``test_*`` which test a unit of logic. - -To run the tests, run ``kedro test`` from the project root directory. -""" - -from pathlib import Path - -import pytest - -from kedro.framework.project import settings -from kedro.config import ConfigLoader -from kedro.framework.context import KedroContext -from kedro.framework.hooks import _create_hook_manager - - -@pytest.fixture -def config_loader(): - return ConfigLoader(conf_source=str(Path.cwd() / settings.CONF_SOURCE)) - - -@pytest.fixture -def project_context(config_loader): - return KedroContext( - package_name="actes_princiers", - project_path=Path.cwd(), - config_loader=config_loader, - hook_manager=_create_hook_manager(), - ) - - -# The tests below are here for the demonstration purpose -# and should be replaced with the ones testing the project -# functionality -class TestProjectContext: - def test_project_path(self, project_context): - assert project_context.project_path == Path.cwd() diff --git a/actes-princiers/templates/xsl/actes_princiers.xsl b/actes-princiers/templates/xsl/actes_princiers.xsl deleted file mode 100644 index 98015a6..0000000 --- a/actes-princiers/templates/xsl/actes_princiers.xsl +++ /dev/null @@ -1,483 +0,0 @@ - - - - - - - - - - -
- -
- -
-
- - -
-
    - -
-
- - - - - - - - - - - - - - - - - - - font-variant: small-caps; background-color: inherit; - - - - - - - - - - - - _blank - - - - - - - - - text_etabli - - - - - - - - - - . - - - - - . - - - - - - - - - - - - - , - - - - - - « - - - », dans - - - - - - - , - - - - - , n° - - - - - - - - - - - - - - - - - - - - - - - , - - - , - - - - - - - - , - - ( - - ), - - - - - , - - - - - , - - - - , - - - - - - p. - - - - - pp. - - - - - - - - - - , n° - - - - - - - - - - - - - . - - - - - - - - - - - , - - - - - - - - , p. - - - - - , pp. - - - - - - - - - , n° - - - - . - - - - - - - text-center - - - - - - . — - - . - - - - - . - - - - - - - - - - - - - - - - analyse - - - - - - - - - - - - - - - - - - tradition - - - - - - - - - - Cliquer pour afficher une image de l'acte. - - - - - - 100% - auto - - - - - - - - - - - - - - - - - - - - - - font-variant: small-caps; background-color: inherit; - - Analyse : - - - - - - - - - - font-variant: small-caps; background-color: inherit; - - Mention : - - - - - - - - - - font-variant: small-caps; background-color: inherit; - - Indiqué : - - - - - - - - - - - - - - - - - - - - # - - - - - - - - - - - - fnref: - - - - - #fn: - - - - footnote - - - - - - - - - - - act - - - - - - - - - - - - - - mht - - - - - (À gauche :) - - - (À droite :) - - - (Sur le repli, à droite :) - - - (Sur le repli, à gauche :) - - - - - - - - - signature - - - - (Signé :) - - - - - - - - - - - - - - . - - - - - - - - - fn: - - - - footnote - - - - - . - - - - - - \ No newline at end of file diff --git a/clean_intermediate_data.sh b/clean_intermediate_data.sh deleted file mode 100755 index 1fdff62..0000000 --- a/clean_intermediate_data.sh +++ /dev/null @@ -1 +0,0 @@ -rm -rf ./actes-princiers/data/02_intermediate/* diff --git a/config.yml b/config.yml deleted file mode 100644 index 37735d3..0000000 --- a/config.yml +++ /dev/null @@ -1,4 +0,0 @@ -output_dir: ~/actes-princiers -project_name: Actes Princiers -repo_name: actes-princiers -python_package: actes_princiers diff --git a/actes-princiers/data/01_raw/csv/actors.csv b/csv/actors.csv similarity index 100% rename from actes-princiers/data/01_raw/csv/actors.csv rename to csv/actors.csv diff --git a/actes-princiers/data/01_raw/csv/anj_isa_i.csv b/csv/anj_isa_i.csv similarity index 100% rename from actes-princiers/data/01_raw/csv/anj_isa_i.csv rename to csv/anj_isa_i.csv diff --git a/actes-princiers/data/01_raw/csv/anj_lo_i.csv b/csv/anj_lo_i.csv similarity index 100% rename from actes-princiers/data/01_raw/csv/anj_lo_i.csv rename to csv/anj_lo_i.csv diff --git a/actes-princiers/data/01_raw/csv/anj_lo_ii.csv b/csv/anj_lo_ii.csv similarity index 100% rename from actes-princiers/data/01_raw/csv/anj_lo_ii.csv rename to csv/anj_lo_ii.csv diff --git a/actes-princiers/data/01_raw/csv/anj_lo_iii.csv b/csv/anj_lo_iii.csv similarity index 100% rename from actes-princiers/data/01_raw/csv/anj_lo_iii.csv rename to csv/anj_lo_iii.csv diff --git a/actes-princiers/data/01_raw/csv/anj_mar_i .csv b/csv/anj_mar_i .csv similarity index 100% rename from actes-princiers/data/01_raw/csv/anj_mar_i .csv rename to csv/anj_mar_i .csv diff --git a/actes-princiers/data/01_raw/csv/anj_re_i.csv b/csv/anj_re_i.csv similarity index 100% rename from actes-princiers/data/01_raw/csv/anj_re_i.csv rename to csv/anj_re_i.csv diff --git a/actes-princiers/data/01_raw/csv/anj_yol_i.csv b/csv/anj_yol_i.csv similarity index 100% rename from actes-princiers/data/01_raw/csv/anj_yol_i.csv rename to csv/anj_yol_i.csv diff --git a/actes-princiers/data/01_raw/csv/brb_agn_i.csv b/csv/brb_agn_i.csv similarity index 100% rename from actes-princiers/data/01_raw/csv/brb_agn_i.csv rename to csv/brb_agn_i.csv diff --git a/actes-princiers/data/01_raw/csv/brb_ann_i.csv b/csv/brb_ann_i.csv similarity index 100% rename from actes-princiers/data/01_raw/csv/brb_ann_i.csv rename to csv/brb_ann_i.csv diff --git a/actes-princiers/data/01_raw/csv/brb_ch_i.csv b/csv/brb_ch_i.csv similarity index 100% rename from actes-princiers/data/01_raw/csv/brb_ch_i.csv rename to csv/brb_ch_i.csv diff --git a/actes-princiers/data/01_raw/csv/brb_lo_ii.csv b/csv/brb_lo_ii.csv similarity index 100% rename from actes-princiers/data/01_raw/csv/brb_lo_ii.csv rename to csv/brb_lo_ii.csv diff --git a/actes-princiers/data/01_raw/csv/bry_je_i.csv b/csv/bry_je_i.csv similarity index 100% rename from actes-princiers/data/01_raw/csv/bry_je_i.csv rename to csv/bry_je_i.csv diff --git a/actes-princiers/data/01_raw/data_actes/diplo_type_data.py b/data_actes/diplo_type_data.py similarity index 100% rename from actes-princiers/data/01_raw/data_actes/diplo_type_data.py rename to data_actes/diplo_type_data.py diff --git a/actes-princiers/data/01_raw/data_actes/house_data.py b/data_actes/house_data.py similarity index 100% rename from actes-princiers/data/01_raw/data_actes/house_data.py rename to data_actes/house_data.py diff --git a/actes-princiers/data/01_raw/data_actes/institution_data.py b/data_actes/institution_data.py similarity index 100% rename from actes-princiers/data/01_raw/data_actes/institution_data.py rename to data_actes/institution_data.py diff --git a/actes-princiers/data/01_raw/data_actes/intervention_data.py b/data_actes/intervention_data.py similarity index 100% rename from actes-princiers/data/01_raw/data_actes/intervention_data.py rename to data_actes/intervention_data.py diff --git a/actes-princiers/data/01_raw/data_actes/princes_data.py b/data_actes/princes_data.py similarity index 100% rename from actes-princiers/data/01_raw/data_actes/princes_data.py rename to data_actes/princes_data.py diff --git a/actes-princiers/data/01_raw/data_actes/state_data.py b/data_actes/state_data.py similarity index 100% rename from actes-princiers/data/01_raw/data_actes/state_data.py rename to data_actes/state_data.py diff --git a/data_registry_add.sh b/data_registry_add.sh deleted file mode 100755 index 999c105..0000000 --- a/data_registry_add.sh +++ /dev/null @@ -1,2 +0,0 @@ -git remote add data git@gitlab.huma-num.fr:medieval-acts/princely-acts/data.git -git subtree add --prefix actes-princiers/data/01_raw data main --squash diff --git a/data_registry_update.sh b/data_registry_update.sh deleted file mode 100755 index d86a38c..0000000 --- a/data_registry_update.sh +++ /dev/null @@ -1 +0,0 @@ -git subtree pull --prefix actes-princiers/data/01_raw data main --squash diff --git a/git_remote_add_data_registry.sh b/git_remote_add_data_registry.sh deleted file mode 100755 index 810206f..0000000 --- a/git_remote_add_data_registry.sh +++ /dev/null @@ -1 +0,0 @@ -git remote add data git@gitlab.huma-num.fr:medieval-acts/princely-acts/data.git diff --git a/actes-princiers/data/01_raw/json/bribes/maison.yaml b/json/bribes/maison.yaml similarity index 100% rename from actes-princiers/data/01_raw/json/bribes/maison.yaml rename to json/bribes/maison.yaml diff --git a/actes-princiers/data/01_raw/json/bribes/prince_codes.yaml b/json/bribes/prince_codes.yaml similarity index 100% rename from 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similarity index 99% rename from actes-princiers/data/01_raw/xml/Bourbon/brb_lo_ii_1365_08_08a.xml rename to xml/Bourbon/brb_lo_ii_1365_08_08a.xml index 62ac8f8..6d396b4 100644 --- a/actes-princiers/data/01_raw/xml/Bourbon/brb_lo_ii_1365_08_08a.xml +++ b/xml/Bourbon/brb_lo_ii_1365_08_08a.xml @@ -54,7 +54,7 @@ A. Original sur parchemin, jadis scellé sur double queue de deux sceaux en cire rouge. 350/345 x 300 mm, repli 35 mm. Paris, Archives nationales, P 1358/2, n°582. -B. Original sur parchemin, jadis scellé de deux sceaux en cire rouge : Paris, Archives nationales, P 1372/2, n°2132. +B. Original sur parchemin, jadis scellé de deux sceaux en cire rouge : Paris, Archives nationales, P 1372/2, n°2132. C. Copie sur papier : Paris, Archives nationales, P 1355/1, n°12. 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